PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.C4XJQ
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 249aa    MW: 28080.4 Da    PI: 7.0806
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.C4XJQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.23e-08141188455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+++Er RR +iN+++  L+ ++P +     k +  a +L + ++Y++sLq
  Aradu.C4XJQ 141 SHSIAERVRRGKINEKLRCLQNIVPGC----YKTMGMAVMLDEIINYVQSLQ 188
                  8*************************9....35599999**********998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.28E-15135203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.29E-9135192No hitNo description
PROSITE profilePS5088814.71137187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-15137196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-5141188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-7143193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MIMKPFLDID PSMDLINQFI GLNTTTTTTT HMNMCDNLFG SHHHHHHHQD DFPGNLEESF  60
HQNHHHHVNN NNASSVVVPV ISSSLLNYYP SENEEIHEGK KRKATTSGNS TPAASHHSES  120
KIIKNNEVVH VRARRGQATD SHSIAERVRR GKINEKLRCL QNIVPGCYKT MGMAVMLDEI  180
INYVQSLQHQ VEFLSLKLTA ASTFYDFNSE TDALETMQRA RASEAKELGK YGKEGHGGVS  240
CYQPNWPLV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312561e-133KT031256.1 Glycine max clone HN_CCL_43 bHLH transcription factor (Glyma07g10311.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015966643.11e-149PREDICTED: transcription factor BEE 1-like
SwissprotQ8GWK74e-62BEE3_ARATH; Transcription factor BEE 3
TrEMBLA0A0L9VHC51e-110A0A0L9VHC5_PHAAN; Uncharacterized protein
TrEMBLA0A0S3TD351e-110A0A0S3TD35_PHAAN; Uncharacterized protein
STRINGGLYMA09G31580.21e-106(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33603467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.14e-62BR enhanced expression 1